Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs2954698 chr8:131744519 G/T 0 119 42.9 27.2 2.9 KM Plot
THYM rs2958719 chr15:78743029 G/A 3.34E-5 119 26 42.47 42.82 KM Plot
THYM rs2959813 chr8:6391182 C/G 2.12E-8 116 42.82 35 12.63 KM Plot
THYM rs302315 chr12:29919054 G/C 7.02E-6 118 38.48 49.73 25.82 KM Plot
THYM rs302317 chr12:29921443 G/A 8.65E-6 116 38.83 49.4 25.82 KM Plot
THYM rs302321 chr12:29928388 A/C 6.04E-6 119 25.82 50.07 38.48 KM Plot
THYM rs3087505 chr4:187179486 A/G 1.14E-8 119 12.63 49.5 38.58 KM Plot
THYM rs3098241 chr8:104425304 A/G 0.000189 119 48.1 32.7 27.1 KM Plot
THYM rs3098258 chr8:104408611 C/T 0.000189 119 48.1 32.7 27.1 KM Plot
THYM rs3117928 chr13:22515687 T/C 0.00029 117 41.22 32.7 27.1 KM Plot
THYM rs3117934 chr13:22517830 G/A 0.000281 118 41.77 32.7 27.1 KM Plot
THYM rs3117935 chr13:22518897 A/G 0.000281 118 41.77 32.7 27.1 KM Plot
THYM rs3117936 chr13:22519168 A/G 0.000281 118 41.77 32.7 27.1 KM Plot
THYM rs3117991 chr13:22514573 G/C 0.00029 117 41.22 32.7 27.1 KM Plot
THYM rs3129641 chr13:22515156 C/T 0.00029 117 41.22 32.7 27.1 KM Plot